Difference between revisions of "CSE 7300 Research Seminar"

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* '''Theme: AI for Health'''
 
* '''Theme: AI for Health'''
 
* '''Instructor''': [http://www.cse.wustl.edu/~lu Prof. Chenyang Lu]
 
* '''Instructor''': [http://www.cse.wustl.edu/~lu Prof. Chenyang Lu]
* '''Semester''': '''Spring 2024'''
+
* '''Semester''': '''Fall 2024'''
 
* '''Time''': Wednesday at 1 PM
 
* '''Time''': Wednesday at 1 PM
 
* '''Location''': McKelvey 1030
 
* '''Location''': McKelvey 1030
Line 12: Line 12:
  
 
==Presentation Schedule==
 
==Presentation Schedule==
=== ---Jan 24 ---===
 
Hangyue
 
  
Krishnamachari, Kiran, See-Kiong Ng, and Chuan-Sheng Foo. "Mitigating Real-World Distribution Shifts in the Fourier Domain." Transactions on Machine Learning Research (2023). [https://openreview.net/pdf?id=lu4oAq55iK]
+
=== ---Sep 11 ---===
 +
Ziqi
  
=== ---Jan 31 ---===
+
Gawlikowski, J., Tassi, C.R.N., Ali, M. et al. A survey of uncertainty in deep neural networks. Artif Intell Rev 56 (Suppl 1), 1513–1589 (2023). [https://doi.org/10.1007/s10462-023-10562-9]
Ruiqi
 
  
Faure, Gueter Josmy, Min-Hung Chen, and Shang-Hong Lai. "Holistic interaction transformer network for action detection." In Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, pp. 3340-3350. 2023. [https://openaccess.thecvf.com/content/WACV2023/papers/Faure_Holistic_Interaction_Transformer_Network_for_Action_Detection_WACV_2023_paper.pdf]
+
=== ---Sep 18 ---===
 +
Daoyi
  
=== ---Feb 07 ---===
+
Hüyük, A., Wei, Q., Curth, A. and van der Schaar, M., 2024. Defining Expertise: Applications to Treatment Effect Estimation. arXiv preprint arXiv:2403.00694. [https://openreview.net/pdf?id=1YPfmglNRU]
Jizhou
 
  
Parikh, Harsh, Quinn Lanners, Zade Akras, Sahar F. Zafar, M. Brandon Westover, Cynthia Rudin, and Alexander Volfovsky. "Estimating Trustworthy and Safe Optimal Treatment Regimes." arXiv preprint arXiv:2310.15333 (2023). [https://arxiv.org/pdf/2310.15333.pdf]
+
=== ---Sep 25 ---===
 +
Jason
  
=== ---Feb 14 ---===
+
=== ---Oct 02 ---===
 
Ben
 
Ben
  
M. Wornow, R. Thapa, E. Steinberg, J. A. Fries, and N. H. Shah, “EHRSHOT: An EHR Benchmark for Few-Shot Evaluation of Foundation Models.” arXiv, Dec. 11, 2023. doi: 10.48550/arXiv.2307.02028.
+
=== ---Oct 09 ---===
 
+
Claire
L. L. Guo et al., “A Multi-Center Study on the Adaptability of a Shared Foundation Model for Electronic Health Records.” arXiv, Nov. 19, 2023. Available: http://arxiv.org/abs/2311.11483
 
 
 
=== ---Feb 21 ---===
 
Quan
 
 
 
Maus, N., Jones, H., Moore, J., Kusner, M. J., Bradshaw, J., & Gardner, J. (2022). Local latent space bayesian optimization over structured inputs. Advances in Neural Information Processing Systems, 35, 34505-34518. [https://proceedings.neurips.cc/paper_files/paper/2022/file/ded98d28f82342a39f371c013dfb3058-Paper-Conference.pdf]
 
 
 
=== ---Feb 28 ---===
 
Ziqi
 
 
 
Oral exam practice
 
 
 
[1] Udandarao, Vishaal, et al. “COBRA: Contrastive Bi-Modal Representation Algorithm”, IJCAI (TUSION workshop) 2020. [https://arxiv.org/pdf/2005.03687.pdf]
 
 
 
[2] Han Zongbo, et al. “Trusted Multi-View Classification.” International Conference on Learning Representations (ICLR). 2020. [https://openreview.net/pdf?id=OOsR8BzCnl5]
 
 
 
[3] Zhenbang Wu et al. “Multimodal Patient Representation Learning with Missing Modalities and Labels”. International Conference on Learning Representations(ICLR), 2024. [https://openreview.net/pdf?id=Je5SHCKpPa]
 
 
 
=== ---Mar 06 ---===
 
Jiaming
 
 
 
Zhang, Nan, Yusen Zhang, Wu Guo, Prasenjit Mitra, and Rui Zhang. "FaMeSumm: Investigating and Improving Faithfulness of Medical Summarization." In Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing, pp. 10915-10931. 2023. [https://aclanthology.org/2023.emnlp-main.673/]
 
 
 
=== ---Mar 13 ---===
 
Spring Break
 
 
 
=== ---Mar 20 ---===
 
Charles
 
  
Van Veen, Dave, Cara Van Uden, Louis Blankemeier, Jean-Benoit Delbrouck, Asad Aali, Christian Bluethgen, Anuj Pareek et al. "Adapted large language models can outperform medical experts in clinical text summarization." Nature Medicine (2024): 1-9. [https://www.nature.com/articles/s41591-024-02855-5]
+
=== ---Oct 16 ---===
 +
Wenyu
  
Liu, Nelson F., Kevin Lin, John Hewitt, Ashwin Paranjape, Michele Bevilacqua, Fabio Petroni, and Percy Liang. "Lost in the Middle: How Language Models Use Long Contexts." Transactions of the Association for Computational Linguistics 12 (2024). [https://watermark.silverchair.com/tacl_a_00638.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAA0YwggNCBgkqhkiG9w0BBwagggMzMIIDLwIBADCCAygGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMTsi8yvo4NZXLClG1AgEQgIIC-QP6KIRyMwLTeCSsvdL7n7VJPdpYJCGAsJSiPlCTsp-P9R6vQOcOuIPoBpjnz9D9HVBMCrXGTFbtSQmvWVmvgAfTu7VE1NUuWAjc7T4Teb_vLoW0caty8PI8NHhhRtXhzTXLC-wOFTaJKgHS3gwA3_oqoTt06gd0qpx9k_cHNP4Vw3OgxNsk39Wog6hdiwyHSuAZ712xY2sBX4jOSby0gjy87KpHWahepzE7zosvbtoCvxB8KbhxwBJJeI22rKoOddd7Gbk0YguJaLMGGRQ7jARou-smLx6v85j3hXMNd__daTr9o7keU_051aiZogDovfrEwqXc7TxMu0XHsVqjot8n16cwun61Y-V5-ll8Ov7wywFcZ9Zt5YWcsSMpx0Zmm7fjz-ocfc1mg_v6ge3HT7uWljVzqP-olpG7CxZbZMjv_sRuV8uaFM78BCrIltCcKNkZSZchckk-BT07vSYTltFcPVx6XpA0g77m2Pnd-Anu-yU8f0PTqyBxGJEw2B0FE5Oo1xGhj8RjcaM0GsA41t5miGQk_WqRdiM8M04dSyc3WG0LZwNaCNT6NVn8tqWMHu1ZaYhY2_FfsYuCEKBvQ7FMsuNym0Qhgc9TKtO3IWj8-3Hod17xvLSuC1xgR4vI07elBv20eFyhQVEmfqCQugfEEpVIVp_zJLZRJDazZrzrm-PbTkDyGjQV7Wc1-Yq_ObsJbScuGxAvi0hprJxftxj6GkGMWVfX9LyZQy6R0v6nsuz8GWYo1fVMeP6j2Y7BjT65igxFbIdS4WCo7foMJbp_0giJIqsTBw5Ai4QqHQqHgJdNwdKB6NkE1B5aJoKYF1_fh4FW8t_0dDo1tbG_TctAMRRqsYcPAjIZfncmxxgOwqWFEg5p1tpT84a-MOFesnvtK1mb2rOaWtcRRL0OnQv83QMVNJMZpF6lylIjGa7LRcRPh5G_JsljtEHSgzMUIkfSs-U0Rx4Wa7xRAd_Mi7cIbKiY_R1V4VawRr40U2LvQ3OHr4Cj3yLe]
+
=== ---Oct 23 ---===
 +
Di
  
=== ---Mar 27 ---===
+
=== ---Oct 30 ---===
Jingwen
+
Behrooz
  
Gouareb, Racha, Alban Bornet, Dimitrios Proios, Sónia Gonçalves Pereira, and Douglas Teodoro. "Detection of Patients at Risk of Multidrug-Resistant Enterobacteriaceae Infection Using Graph Neural Networks: A Retrospective Study." Health Data Science 3 (2023): 0099. [https://spj.science.org/doi/full/10.34133/hds.0099]
+
=== ---Nov 06 ---===
 +
Prince
  
=== ---Apr 03 ---===
+
=== ---Nov 13 ---===
Hanyang
+
Zichen
  
Jin, Ming, et al. "Time-llm: Time series forecasting by reprogramming large language models." ICLR 2024.
+
=== ---Nov 20 ---===
 +
Peiqi
  
=== ---Apr 10 ---===
+
=== ---Nov 27 ---===
Zebo
+
Thanksgiving
Lockwood, Owen, and Mei Si. "Reinforcement learning with quantum variational circuit." In Proceedings of the AAAI conference on artificial intelligence and interactive digital entertainment, vol. 16, no. 1, pp. 245-251. 2020. [https://ojs.aaai.org/index.php/AIIDE/article/view/7437]
 
 
 
=== ---Apr 17 ---===
 
Claire
 
 
 
=== ---Apr 24 ---===
 
Daoyi
 
  
  
 
==Previous Semesters==
 
==Previous Semesters==
 +
* [[Seminar Spring 2024|Spring 2024]]
 
* [[Seminar Fall 2023|Fall 2023]]
 
* [[Seminar Fall 2023|Fall 2023]]
 
* [[Seminar Spring 2023|Spring 2023]]
 
* [[Seminar Spring 2023|Spring 2023]]

Latest revision as of 19:06, 18 September 2024

  • Theme: AI for Health
  • Instructor: Prof. Chenyang Lu
  • Semester: Fall 2024
  • Time: Wednesday at 1 PM
  • Location: McKelvey 1030
  • Guidelines:
  • Recommended sources: NeurIPS ([1]), ICML ([2]), AAAI ([3]), SIGKDD ([4]), IJCAI ([5]), IMWUT ([6]), HEALTH ([7]), Digital Medicine ([8]), Lancet Digital Health ([9]), NEJM AI ([10])

Presentation Schedule

---Sep 11 ---

Ziqi

Gawlikowski, J., Tassi, C.R.N., Ali, M. et al. A survey of uncertainty in deep neural networks. Artif Intell Rev 56 (Suppl 1), 1513–1589 (2023). [11]

---Sep 18 ---

Daoyi

Hüyük, A., Wei, Q., Curth, A. and van der Schaar, M., 2024. Defining Expertise: Applications to Treatment Effect Estimation. arXiv preprint arXiv:2403.00694. [12]

---Sep 25 ---

Jason

---Oct 02 ---

Ben

---Oct 09 ---

Claire

---Oct 16 ---

Wenyu

---Oct 23 ---

Di

---Oct 30 ---

Behrooz

---Nov 06 ---

Prince

---Nov 13 ---

Zichen

---Nov 20 ---

Peiqi

---Nov 27 ---

Thanksgiving


Previous Semesters

Previous Lab Meetings